New Guidestar report suggests that women CEOs of non-profits are paid less than men.  The report found that for the 14th year in a row, median compensation for female CEOs lagged behind that of respective male CEOs by up to 23 percent depending on the organization size. It also found that only 17 percent of organizations with budgets larger than $50 million had a female CEO, compared to smaller organizations with less than a million dollar budget, the majority of which have women CEOs.The report found that for the 14th year in a row, median compensation for female CEOs lagged behind that of respective male CEOs by up to 23 percent depending on the organization size. It also found that only 17 percent of organizations with budgets larger than $50 million had a female CEO, compared to smaller organizations with less than a million dollar budget, the majority of which have women CEOs.  Non Profit Salaries